Reactome: A Curated Pathway Database

Attributes of class 'ProteinDrug'

Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
authored 1 INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
cellType 1 INSTANCE CellType PhysicalEntity ALL INTEGER(10) UNSIGNED
compartment + INSTANCE EntityCompartment PhysicalEntity ALL INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
crossReference + INSTANCE DatabaseIdentifier PhysicalEntity   INTEGER(10) UNSIGNED
definition 1 TEXT N/A PhysicalEntity   TEXT
disease + INSTANCE Disease PhysicalEntity ALL INTEGER(10) UNSIGNED
edited + INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
figure + INSTANCE Figure PhysicalEntity   INTEGER(10) UNSIGNED
goCellularComponent 1 INSTANCE GO_CellularComponent PhysicalEntity   INTEGER(10) UNSIGNED
inferredFrom + INSTANCE PhysicalEntity PhysicalEntity   INTEGER(10) UNSIGNED
inferredTo + INSTANCE PhysicalEntity PhysicalEntity   INTEGER(10) UNSIGNED
literatureReference + INSTANCE Publication PhysicalEntity   INTEGER(10) UNSIGNED
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
name + TEXT N/A PhysicalEntity   TEXT
referenceEntity 1 INSTANCE ReferenceGeneProduct ProteinDrug ALL INTEGER(10) UNSIGNED
referenceTherapeutic 1 INSTANCE ReferenceTherapeutic Drug ALL INTEGER(10) UNSIGNED
reviewed + INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
revised + INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED
summation + INSTANCE Summation PhysicalEntity   INTEGER(10) UNSIGNED
systematicName 1 TEXT N/A PhysicalEntity   TEXT

Referers of class 'ProteinDrug' instances

Class name Attribute name Cardinality
VertexSearchableTerm termProvider +
DefinedSet inferredFrom +
PhysicalEntity inferredFrom +
OpenSet inferredFrom +
OtherEntity inferredFrom +
SimpleEntity inferredFrom +
EntityWithAccessionedSequence inferredFrom +
Polymer inferredFrom +
CandidateSet inferredFrom +
GenomeEncodedEntity inferredFrom +
EntitySet inferredFrom +
Drug inferredFrom +
ProteinDrug inferredFrom +
ChemicalDrug inferredFrom +
Complex inferredFrom +
RNADrug inferredFrom +
Complex hasComponent +
GenomeEncodedEntity inferredTo +
CandidateSet inferredTo +
EntitySet inferredTo +
Complex inferredTo +
RNADrug inferredTo +
Drug inferredTo +
ChemicalDrug inferredTo +
ProteinDrug inferredTo +
OpenSet inferredTo +
DefinedSet inferredTo +
PhysicalEntity inferredTo +
SimpleEntity inferredTo +
Polymer inferredTo +
EntityWithAccessionedSequence inferredTo +
OtherEntity inferredTo +
Polymerisation requiredInputComponent +
Depolymerisation requiredInputComponent +
BlackBoxEvent requiredInputComponent +
Reaction requiredInputComponent +
FailedReaction requiredInputComponent +
ReactionlikeEvent requiredInputComponent +
PositiveGeneExpressionRegulation activeUnit +
NegativeGeneExpressionRegulation activeUnit +
Requirement activeUnit +
Regulation activeUnit +
NegativeRegulation activeUnit +
PositiveRegulation activeUnit +
CatalystActivity activeUnit +
Polymerisation entityOnOtherCell +
Depolymerisation entityOnOtherCell +
Reaction entityOnOtherCell +
BlackBoxEvent entityOnOtherCell +
Complex entityOnOtherCell +
FailedReaction entityOnOtherCell +
ReactionlikeEvent entityOnOtherCell +
ConcurrentEventSet focusEntity +
Depolymerisation output +
Polymerisation output +
ReactionlikeEvent output +
FailedReaction output +
Reaction output +
BlackBoxEvent output +
Depolymerisation input +
Polymerisation input +
FailedReaction input +
Reaction input +
BlackBoxEvent input +
ReactionlikeEvent input +
DefinedSet hasMember +
EntitySet hasMember +
CandidateSet hasMember +
OpenSet hasMember +
PositiveGeneExpressionRegulation regulator 1
NegativeGeneExpressionRegulation regulator 1
Requirement regulator 1
PositiveRegulation regulator 1
NegativeRegulation regulator 1
Regulation regulator 1
EntityVertex representedInstance 1
CandidateSet hasCandidate +
CatalystActivity physicalEntity 1
EntityFunctionalStatus physicalEntity 1
Polymer repeatedUnit +
_Deleted replacementInstances +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.