Reactome: A Curated Pathway Database

Attributes of class 'EntityCompartment'

Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
accession 1 TEXT N/A GO_CellularComponent ANY TEXT
componentOf + INSTANCE GO_CellularComponent GO_CellularComponent   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
definition 1 TEXT N/A GO_CellularComponent   TEXT
hasPart + INSTANCE GO_CellularComponent GO_CellularComponent   INTEGER(10) UNSIGNED
instanceOf + INSTANCE GO_CellularComponent GO_CellularComponent   INTEGER(10) UNSIGNED
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
name + TEXT N/A GO_CellularComponent   TEXT
referenceDatabase 1 INSTANCE ReferenceDatabase GO_CellularComponent   INTEGER(10) UNSIGNED
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'EntityCompartment' instances

Class name Attribute name Cardinality
EntitySet compartment +
OpenSet compartment +
RNADrug compartment +
Depolymerisation compartment +
Polymerisation compartment +
SimpleEntity compartment +
Complex compartment +
EntityWithAccessionedSequence compartment +
GenomeEncodedEntity compartment +
ReactionlikeEvent compartment +
Pathway compartment +
DefinedSet compartment +
Reaction compartment +
ChemicalDrug compartment +
Event compartment +
Drug compartment +
Polymer compartment +
PhysicalEntity compartment +
ProteinDrug compartment +
OtherEntity compartment +
BlackBoxEvent compartment +
CandidateSet compartment +
FailedReaction compartment +
EntityCompartment instanceOf +
Compartment instanceOf +
GO_CellularComponent instanceOf +
DefinedSet goCellularComponent 1
EntitySet goCellularComponent 1
Drug goCellularComponent 1
RNADrug goCellularComponent 1
ChemicalDrug goCellularComponent 1
OpenSet goCellularComponent 1
PhysicalEntity goCellularComponent 1
SimpleEntity goCellularComponent 1
Complex goCellularComponent 1
Polymer goCellularComponent 1
CandidateSet goCellularComponent 1
GenomeEncodedEntity goCellularComponent 1
ProteinDrug goCellularComponent 1
EntityWithAccessionedSequence goCellularComponent 1
OtherEntity goCellularComponent 1
Complex includedLocation +
Compartment componentOf +
GO_CellularComponent componentOf +
EntityCompartment componentOf +
GO_CellularComponent hasPart +
Compartment hasPart +
EntityCompartment hasPart +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.